moscot.base.problems.CompoundProblem¶
- class moscot.base.problems.CompoundProblem(adata, **kwargs)[source]¶
Base class for all biological problems.
This class translates a biological problem to multiple OT problems.
Methods
add_problem
(key, problem, *[, overwrite])Add a subproblem.
load
(path)Load the model from a file.
prepare
(policy, key[, subset, reference, ...])Prepare the individual OT subproblems.
pull
(*args, **kwargs)Pull mass from target to source.
push
(*args, **kwargs)Push mass from source to target.
remove_problem
(key)Remove a subproblem.
save
(path[, overwrite])Save the problem to a file.
solve
([stage])Solve the individual OT subproblems.
Attributes