moscot.datasets.hspc#

moscot.datasets.hspc(path='~/.cache/moscot/hspc.h5ad', force_download=False, **kwargs)[source]#

CD34+ hematopoietic stem and progenitor cells from 4 healthy human donors.

From the NeurIPS Multimodal Single-Cell Integration Challenge.

4000 cells were randomly selected after filtering the multiome training data of the donor 31800. Subsequently, the top 2000 highly variable genes were selected. Peaks appearing in less than 5% of the cells were filtered out, resulting in 11595 peaks.

Parameters:
Return type:

AnnData

Returns:

: Annotated data object.