moscot.datasets.mosta

moscot.datasets.mosta(path='~/.cache/moscot/mosta.h5ad', force_download=False, **kwargs)

Preprocessed and extracted data as provided in [Chen et al., 2022].

Includes embryo sections E9.5, E2S1, E10.5, E2S1, E11.5, E1S2.

The anndata.AnnData.X is based on reprocessing of the counts data using scanpy.pp.normalize_total() and scanpy.pp.log1p().

Parameters:

• path (Union[PathLike, str]) – Path where to save the file.

• force_download (bool) – Whether to force-download the data.

• kwargs (Any) – Keyword arguments for scanpy.read().

Return type:

AnnData

Returns:

: Annotated data object.