moscot.datasets.tedsim#

moscot.datasets.tedsim(path='~/.cache/moscot/tedsim.h5ad', force_download=False, **kwargs)[source]#

Dataset simulated with TedSim [Pan et al., 2022].

Simulated scRNA-seq dataset of a differentiation trajectory. For each cell, the dataset includes a (raw counts) gene expression vector as well as a lineage barcodes. The data was simulated with asymmetric division rate of \(0.2\), intermediate state step size of \(0.2\) and contains the following fields:

Parameters:
Return type:

AnnData

Returns:

: Annotated data object.