moscot.costs.BarcodeDistance

class moscot.costs.BarcodeDistance(adata, **kwargs)

Scaled Hamming distance between barcodes.

See also

• See Including barcode information via barcode distances on how to use this cost in the LineageProblem.

Parameters:

• adata (AnnData) – Annotated data object.

• kwargs (Any) – Additional keyword arguments for the BaseCost.

Methods

__call__(*args, **kwargs)

Compute the cost matrix.

Attributes

adata	Annotated data object.
barcodes	Barcodes.