UtilsΒΆ

subset_policy.SubsetPolicy(adata[, key, ...])

Base policy class.

subset_policy.OrderedPolicy(adata[, key, ...])

Base ordered policy.

subset_policy.StarPolicy(adata[, key, ...])

Policy with a star topology.

subset_policy.ExternalStarPolicy(adata[, ...])

Policy with star topology and external central node.

subset_policy.SequentialPolicy(adata[, key, ...])

Policy which connects immediate successors.

subset_policy.TriangularPolicy(adata[, upper])

Policy which connects all preceding/subsequent nodes.

subset_policy.ExplicitPolicy(adata[, key, ...])

Explicitly specified policy.

data.transcription_factors(organism)

Get transcription factors for a selected organism.

data.proliferation_markers(organism)

Get proliferation markers for a selected organism.

data.apoptosis_markers(organism)

Get apoptosis markers for a selected organism.

tagged_array.TaggedArray(data_src[, ...])

Interface to interpret array-like data for moscot.solvers.

tagged_array.Tag(value)

Tag in the TaggedArray.

tagged_array.DistributionCollection

Collection of distributions.

tagged_array.DistributionContainer(xy, xx, ...)

Data container for OT problems involving more than two distributions.